The auto-focus motor on your D90 does just that - it autofocuses autofocus lenses, nothing more.
You are stating that the lenses are mf - manual focus. This means that there is nothing in the lens for the motor to connect to, you simply turn the focus ring until the subject is sharp. Some camera bodies will give you focus confirmation, I don't know whether the D90 has focus confirmation.
Otherwise, as long as the lenses are compatible (most are, unless really old), you will be able to use the lens in manual exposure mode or aperture priority mode, but focused manually.
There are now lots of photographers using manual focus lenses on m4/3 and similar cameras.
HTH.